Preeti Aahir

Computational Biologist | Cancer, MS, Infectious Disease | #Single Cell genomics. Tweets are no bots

[Preeti Aahir @preeti_aahir]

@tangming2005 Congratulations 🎊 Tommy and welcome to the team 😊

[Preeti Aahir @preeti_aahir]

@harvard_data fantastic talk by @marinkazitnik on applying #LLM in context of Genomics 🧬 and proteomics data. #HarvardDataScience #AIInnovation #AIinMedicine #womeninSTEM

[Rob Donnelly @RobDonnelly47]

Friends don't let friends make bad charts!

Chenxin Li, pulled together a lot of great advice for data visualization, with clear "do this, not that" examples for each item.

Here are a few of my favorites, see the link below for more.

[Patrick Hsu @pdhsu]

The first approved CRISPR medicine in the world for sickle cell disease and beta thalassemia!

A huge victory for biotechnology, patients, and humanity

https://t.co/hsxHRpPlg1

[Abhinav @abhi18av]

What an honor to represent the communities of
@nf_core and @nextflowio at this wonderful event, the 💯 training material and brilliant docs 💚

Couldn't have asked for a better stage than #VEME2023 to share the importance of reproducible research, #collaboration and #openscience

[brent pedersen @brent_p]

somalier can find relatedness among thousands (or a handful if that's what you have) of samples in seconds. latest release updates a lesser-used feature to find your own sites with which to calculate kinship: https://t.co/etNxULXsk4

thanks @johanneskoester for reporting!

[Mark @Sanbomics]

RNAseq counting tools are not perfect. I simulated 240 GTEx samples to test multiple tools. Below I show the difference between actual and estimated counts for each simulated sample.

But, what is causing this? And will it affect differential expression? (1/7) #Bioinformatics

[Anshul Kundaje @anshulkundaje]

When I was in school & college, I loved biology at least partly because of all of the beautiful figures of cells & organelles in some of the fabulous books. But this is just next-level. I don't know how any young person can resist diving deep into the beauty & mystery of life.

[Michael Pyrcz🌻 @GeostatsGuy]

Many people struggle to understand #Bayesian updating! So I made this super cool #Python @matplotlib #educational, interactive dashboard.

Given a positive test, '+', what is the probability that the an 'Event' is happening? Change the probability of the event, P(Event), true positive, P(+|Event), and false positive, P(-|Event), conditional probabilities, then watch the change in the posterior, P(Event|+)!

I also added P(Not Event|+), P(Event|-) & P(Not Event|-).

Try it out on https://t.co/e1JuUwgDbg ∀.

[Preeti Aahir @preeti_aahir]

@linylinx Nailed it !!

[David Sinclair @davidasinclair]

We ingest 0.5 to 5 g of microplastics a week ☕️🫖💧, which can disrupt the intestinal barrier & cause inflammation. New study 🐁 finds calorie restriction makes plastic worse. What should you do? … https://t.co/Ya76GtjloO

[Dillon Niederhut PhD is at #SciPy2026 @dillonniederhut]

One of the weird things about working in the #Python community is that our core technologies are mostly not written in Python.

If someone wants to contribute code, now they have two problems.

- Michael Droettboom at #SciPy2023

[brent pedersen @brent_p]

bedder-tools 😜 is the next generation of bedtools from @aaronquinlan lab. It's early days, but we think the foundation is solid. We're looking for feedback on the rust code. Have a look: https://t.co/amynzntTen and specifically about design here: https://t.co/JM6BROlq6o

[Ming "Tommy" Tang @tangming2005]

BioAlpha - hundreds to thousands times faster than Seurat/scanpy. Now you can run the full single cell pipeline for million cell dataset - under a minute. ⁦@ksonpham⁩ ⁦@bioturing⁩ https://t.co/OQ4dus6DKz

[Mark Manson @Markmanson]

The essence of being an emotionally intelligent person is being able to know when an emotion deserves a response and when an emotion deserves to be acknowledged, experienced, and then politely shown the door.

[Treutlein lab @TreutleinLab]

Happy to announce #SCG2023! For the first time in the Swiss Alps! Exciting speakers! Website is up! Save-the-date: Registration opens May 2nd. https://t.co/2A2iwuHtbR @IdoAmitLab, AmosTanay, @slinnarsson, @sandberglab, @AlexandervanOu1, @MarioniLab AvivRegev @genentech, @ETH_en

[Chris Toseland @ChrisToseland]

I don’t usually post personal news but Clinicians have told us to pull every lever.

Our daughter has with #dipg Brain cancer. There is no cure and typically 9m life expectancy.

If anyone knows of trials then please get in contact! #braincancer #childrenscancer @CR_UK

[Eric Vallabh Minikel @cureffi]

If an ASO lowers target RNA 50% in bulk brain tissue, is it 50% in all cells or 100% in half? Are cell types all impacted equally? Does CSF reflect neuronal target engagement?

We did single-cell seq in ASO-treated mice & NHPs to find out https://t.co/2rR8ICVm0s

Thread 👇

[Preeti Aahir @preeti_aahir]

Hello Everyone! Twitter account has been pain lately! My account has been hacked, pls ignore spam msgs from this account if u hv got any! #Hacked

[Data Science Dojo @DataScienceDojo]

💥 An overview of probability distribution!
Source: Data Science Community

#Probability #Statistics #DataScience