Vania Gavrila

Biotech x Biomedical Scientist 👩🏻‍🔬 DNA sequencing technologies and precision medicine enthusiast 🧬

[Mile Sikic @msikic]

Our hitchhiking paper is out at https://t.co/CX6347vrmF - a great collaborative effort with @msprasad693 @JosipaLipovac, @FilipTomas95 JJ Liu.

Briefly, @nanopore is enough for high-quality human genomes. Recently, HERRO showed that even UL is sufficient. 1/3

[Anton🔬 @AOUBIO]

MPOX update: Our @nanopore sequencing protocol/primers for #MPOX clade IIB also work for clade IB.

As this is confirmed by work performed in DRC using these primer sets by @Udahemuka1 @1986Bom @MarionKoopmans

Publication Eurosurveillance:
https://t.co/fHYU245vd7

1/2

[Lara Urban @LaraUrban42]

"Air monitoring by @nanopore sequencing" has now been peer-reviewed by @ISME_microbes: https://t.co/uYXrM8HuA1
Huge congrats again to first authors Tim Reska & Sofya Pozdniakova and to the entire team @HelmholtzMunich @helmholtz_ai @ISGLOBALorg @DLR_en @TU_Muenchen!

[Vania Gavrila @vaniagvr]

@Thidathipw Love that pink gloves!! 💖

[Vania Gavrila @vaniagvr]

@tickteng @brin_indonesia @advisains @nanopore Hi @tickteng! We did whole genome sequencing for this workshop ☺️

[Vania Gavrila @vaniagvr]

Together with @brin_indonesia and @advisains we are doing a workshop to sequence Avian samples! Looking forward to see more genomes 🐓🐦‍🔥 we sneak a plant sample, thanks to the simplicity and flexibility of @nanopore library preparation steps 🧬

[ADVISAINS.ID @advisains]

Hari kedua kegiatan workshop 'Optimizing Nanopore Sequencing for Avian Samples' di Lab Genomik BRIN dengan fokus Hands-on Library preparation and Sequencing.🧬 #nanopore #Oxford Nanopore Technologies

[PŪNGAO ⚡️🍯 @realpungao]

Most people are unaware that the saying “drink 6-8 glasses of water a day” comes from a 1945 recommendation based on zero medical research.

In reality, proper hydration is much more complex than that.

Here’s how you actually achieve it:

(thread 🧵)

[Samuel Hume @DrSamuelBHume]

The 10 biggest cancer papers of the last 10 years (in my opinion)

1. Blocking PD1 activates the immune response against cancer - especially if the cancer has more mutations

https://t.co/rBCVRcDfvo

[Taco Jesse @TJesse62]

Congrats to @msikic & Team with the HERRO paper.
A Giant Leap forward!🚀
@nanopore
#nanoporeconf

[Taco Jesse @TJesse62]

-
💥A Giant Leap Forward💥

Don’t miss the HERRO-Hero !

@msikic is Changing the Game🚀

🌟 @ LC2024 on Thursday 🌟

@nanopore
#nanoporeconf

[Eric Topol @EricTopol]

We very much need and could build a global environmental DNA (eDNA) resource
https://t.co/RKhHFY1pRA
@CellCellPress @francis_thomsen @evaegelyng
@MadsRJ

[Keisuke Motone / 元根 啓佑 @KeisukeMotone]

Our preprint has been featured. Thank you @Nature

Powerful ‘nanopore’ DNA sequencing method tackles proteins too https://t.co/mvP3G3KAAW

[Eric Topol @EricTopol]

People with 2 copies of APOE4 were known to have a high risk of #Alzheimers.
Today that changed to nearly 100% full penetrance
@NatureMed
https://t.co/2JA7KcpmLC

[Christian Thomas @thomachr87]

Always thought #Nanopore sequencing from #FFPE is impossible? Explore our paper: https://t.co/8KuCZxvRYw. Methylation & CNV profiling of CNS tumors. Great collaboration with @ulrichschueller and @LschweizerLeo. @nanopore

[Mile Sikic @msikic]

Ready for >Q30 ONT reads? Herro error correction now supports both R9.4.1 and R10.4.1. simplex reads w/ @domstanojevic @DehuiLin (CHM13 -R9.4.1) #nanopore #longreads

[Aaron Pomerantz, PhD @AaronPomerantz]

Exciting webinar coming up - Advancements in @nanopore Sequencing for Enhanced Food Safety and Quality Assurance

Food microbiologists will share how new genomic tools can help create a safer and more digital, traceable food system

May 16, 11:00 AM ET
https://t.co/FKtBcBtcDl

[Matt Loose @mattloose]

Updated ultra long read Protocol from @NininUon available - see https://t.co/0olzpP3Zm8 for info and also Ninin’s recent talk to the T2T groups - https://t.co/0Q2fdktGUQ

[Steven Salzberg 💙💛 @StevenSalzberg1]

and the answer is: still not sure yet. Close to 20,000 protein-coding genes but more like 100,000 different protein isoforms. And noncoding RNAs? Who knows?

[Tip @Thidathipw]

@nanopore workshop
Thai + Indonesia + Burmese
Long-read metagenomics ✨
#promethion #flongle #minion

[Anita S @mitokondrion]

NEW! @WHO guidelines recommending the use of targeted NGS for drug-resistant TB diagnosis!
Grateful & proud to lead the genomics team @FINDdx behind the massive efforts leading to this policy with @UNITAID support https://t.co/bG51ww5cUC @paimadhu @Mruhwald