Happy to share SHARC, a method for rapid identification of tumor-specific genomic structural variants using low-pass @nanopore sequencing https://t.co/QgWyrCLpXP @Jaesvi42 @Ch_Stangl @MartijnLolkema
Introducing MrHAMER, our @nanopore-based high accuracy viral sequencing platform that yields single-molecule reads to ≥99.9% accuracy. Truly a team effort at the @BruceTorbett and @AndrewRouth labs. A thread 🧵...
https://t.co/SYeVB19cNJ
Our latest #CDlab paper is on @arxiv: https://t.co/VzP66nIGMe
PhD student Nils Klughammer developed Pd Zero-Mode Waveguides for optical detection of single fluorophores, proteins, DNA in multiple colors with superior signal-to-noise compared to ion-current detection in nanopores
FUDGE is out! Happy that our assay for rapid fusion gene detection using @nanopore sequencing got published today @NatureComms
Thanks to @gmonroe3@GijsvanHaaften@WigardK@anton_gh @Jaesvi42 and EVERYONE else, it was fun working with you!
https://t.co/UTxbeJbm8A
Check out our latest work with @HubnerLab @MDC_berlin on the role of long noncoding RNAs (lncRNAs) and #lncRNA-encoded #microproteins in human #pancreas development! A short thread 1/9
https://t.co/0Y6FmhLI5A
Frame is happy to announce a new research collaboration with eTheRNA immunotherapies NV to develop mRNA cancer vaccines against immunogenic neoantigens. Read more on our website: https://t.co/922vsrc4MA
Want to know more about the molecular characteristics of ovarian granulosa cell tumors? Check out our manuscript. #medrxivpreprint#UMCU_CMM https://t.co/aTBXx1fUlK
“Het is echt een hele goede investering als we in het zorgsysteem deze test vergoed kunnen krijgen” @LeonieSazias en Emile Voest van @hetAVL vertellen bij OP1 waarom ze vinden dat kankerpatiënten een uitgebreide DNA-test zouden moeten krijgen https://t.co/eO8N6xnIsU #wgstest
We call it: Next generation cytogenetics!
Very proud of our amazing team here. We used Bionano’s genome imaging technology to test 48 clinically well studied leukemia samples to test its utility: https://t.co/FKIoBaDohg
Read Until to enrich >700 genes to mean 30x coverage on @nanopore single flowcell. Custom panels (up to 25,600 targets so far) as easy as providing a coordinate file. Read more at https://t.co/aZVOs23PKg - thanks to @alexomics, @Rorymatics and @DeepSeqNotts team.
Today we’ve introduced R10.3 flow cells to the store. Building on R10 — which was recently shown to produce 99.995% single molecule consensus accuracy — R10.3 provides increased throughput and better raw read accuracy. Read more: https://t.co/HCGcPptPjB
Application of CHORD on the @HartwigMedical whole genome sequenced cancer cohort reveals Pan-cancer landscape of homologous recombination deficiency. 30% of HRD in ovarian cancers and 12% in breast, but also 13% in prostate and pancreatic cancer. https://t.co/RBjT0oB2ad