Bri Rogers, PhD

Postdoc in Cochran Lab @HudsonAlpha | PhD from @UABNews | Neurogenetics

[Luciano Martelotto 🛠🧬💻🇦🇺 @LGMartelotto]

#easySHARE-Seq: Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells | bioRxiv https://t.co/4lx5DErWPV

[Center for Disease Neurogenomics @CDNeurogenomics]

We created a cross-disorder atlas of the human DLPFC exploring inter-individual & cross-disorder transcriptome variations. We aimed to provide a foundational framework for targeted, cross-disorder treatments that address the molecular complexity of brain dysfunction. #PsychAD

[Jennifer Yokoyama @YokoyamaLabUCSF]

Only the 1st installment with much more to come…the 1st ReDLat Genomics Report 🧬 highlights ancestral background and pathogenic variation! Full-sized ms w/local ancestry mapping, pedigrees, + detailed clinical vignettes will be in published paper! https://t.co/ETe1YeThUw

[Jennifer Yokoyama @YokoyamaLabUCSF]

Check out our new preprint showing our ability to use epigenetic age measured from blood to predict AD progression & cortical atrophy! ⁦@dwsir⁩ ⁦@UCSFimaging⁩ ⁦@UCSFmac⁩ ⁦@nanosanta⁩ ⁦@AgustinMIbanez⁩ ⁦⁦@Cornell⁩ https://t.co/QiB9IcvJhR

[Rahul Satija @satijalab]

Cool work from @spyros_darmanis that performs combinatorial-based superloading of @10xGenomics for scRNA-seq and multiome assays. Interesting idea to add the 10x barcode first, then the second barcode later: https://t.co/b9UUYpcoIT

[Cell Genomics @CellGenomics]

Analysis of single-cell CRISPR perturbations indicates that enhancers predominantly act multiplicatively https://t.co/w4iFUlrIeQ

[Anna Cook @akcook4]

Stop by my poster tomorrow to hear about how progranulin insufficiency influences inflammation in response to TDP-opathy! October 6th from 8-12, poster C13! #sfn2024

[Becky Hauser @hauser_becky]

If you’re at SFN this week, come by my poster! Especially if you like Tau, regulatory elements, and MPRAs. I’m excited to share what I’ve been working on during my postdoc. Poster B133 today (Saturday) from 1-5. #sfn2024 #sfn24

[Feixiong Cheng @FeixiongCheng]

We identified Widespread transposable element dysregulation in human aging brains with Alzheimer’s disease and validated it by CRISPR from @YinShenLab Thanks @NIHAging @CCLRI @YinShenLab https://t.co/vlWVLOy2DW

[HudsonAlpha @hudsonalpha]

Dr. @bbrogers_, a postdoc associate in Dr. @jNickCochran's lab at HudsonAlpha, is embarking on a groundbreaking project with the @APDAParkinsons!

Learn more about the cutting-edge research she will be conducting now: https://t.co/rWs3jzJXyU

[Ashlyn Anderson @Ashlyn_Anderso]

Excited to share our latest work is published @GenomeResearch! We explored allele-specific transcription factor binding across nine brain regions, offering new insights into gene regulation and the role of genetic variation in the brain https://t.co/eTcWqI1pN0 1/

[Martin Kampmann @MartinUCSF]

Cross-disorder and disease-specific pathways in dementia revealed by single-cell genomics

Exciting work @RexachLab & @GeschwindLab, comparing #Alzheimers & other tauopathies

Suggests shared & disease-specific mechanisms of selective vulnerability & glia

https://t.co/BlJZIsZbAO

[Bri Rogers, PhD @bbrogers_]

Excited to share that I’ve been awarded a fellowship from the American Parkinson Disease Association (APDA)! Thanks to APDA for their generous support and @jNickCochran for his mentorship in designing this project! @APDAParkinsons @hudsonalpha

[American Parkinson Disease Association @APDAParkinsons]

APDA is excited to announce the inspiring researchers and exciting projects being funded for the 2024-2025 year! With $2.6 Million in new funding an increase of over 30 percent from the year before, find out more on our website and see the full list:

https://t.co/BXxctlFbK1

[HudsonAlpha @hudsonalpha]

NEW: @jNickCochran & @RickMyers_PhD were awarded an @NIH grant to study a gene linked to various dementias. Their research could bring us closer to understanding and potentially treating different complex conditions.

Read more: https://t.co/FFIExPkctx

[Denis Wirtz @deniswirtz]

UPDATED: we have identified 313 (!) funding opportunities and fellowships for postdoctoral fellows.

Download this database freely here: https://t.co/EbTahdzJ9X

For each entry, we provide description, amount, deadline, eligibility, and link to funder.

Good luck!

[Katie Galloway @GallowayLabMIT]

Levels of gene expression matter! So how can you control a transgene precisely? Is there a tool that can ensure uniform control & the ability to adjust the setpoint of expression from a single promoter? Introducing DIAL! 🧵 (1/n)
Link: https://t.co/MeEmOzMptv

[Thomas Norman @thenormanlab]

Excited to share our preprint "Multiome Perturb-seq unlocks scalable discovery of integrated perturbation effects on the transcriptome & epigenome". This work extends single-cell CRISPR screens to simultaneously profile gene expression & chromatin accessibility.

[Oded Rechavi @OdedRechavi]

It took more than a DECADE... but finally it’s published!!! It started as a CRAZY idea but after tons of hard work we built it: We hijacked the endogenous secretion systems of Toxoplasma gondii, a brain parasite, to deliver active proteins to neurons 👇
https://t.co/I2j2pAel69

[Noelia Antón-Bolaños @BolanosAnton]

📢Thrilled! My 1st piece of work of my postdoc at @Arlottalab is out @Nature! This has been a huge co-lead effort with @IreneFaravelli👩‍🔬👩‍🔬🤩
Link: https://t.co/9HmNVh0SQZ
Tweetorial 👇🧵

[Rahul Satija @satijalab]

Interested in 3' UTR changes in scRNA-seq? Check out our:
* CPA-Perturb-seq paper
* UCSC Perturb-seq tracks (see who regulates your favorite 3’ UTR!)
* Seurat extension for polyA site analysis (PASTA)
* Deep neural perturbation network (APARENT-Perturb)
https://t.co/XXYEBHV1iG