Very excited to share our preprint: Self-Speculative Masked Diffusions
We speed up sampling of masked diffusion models by ~2x by using speculative sampling and a hybrid non-causal / causal transformer
https://t.co/6e37sx8Cbu
w/ @ValentinDeBort1@thjashin@ArnaudDoucet1
Super excited to preprint our work on developing a Biomolecular Emulator (BioEmu): Scalable emulation of protein equilibrium ensembles with generative deep learning from @MSFTResearch AI for Science.
#ML#AI#NeuralNetworks#Biology#AI4Science
https://t.co/yzOy6tAoPv
Discrete generative models use denoisers for generation, but they can slip up. What if generation *isn’t only* about denoising?🤔
Introducing DDPD: Discrete Diffusion with Planned Denoising🤗🧵(1/11)
w/ @junonam_@AndrewC_ML@HannesStaerk@xuyilun2 Tommi Jaakkola @RGBLabMIT
@FrankNoeBerlin Thanks Frank! This is a choice we can make at inference time, we can sample with 'low stochasticity' where tokens commit or with 'high stochasticity' where tokens can switch back to mask (see gif). This enables the model to correct mistakes during generation.
New paper: how to do flow matching on discrete data.
Flows give a simple generative framework and better performance than discrete diffusion models.
Discrete flows are easily combined with continuous flow matching for multimodal models.
https://t.co/7eQNl1myrS
A thread 1/7
Combining discrete and continuous data is an important capability for generative models. To address this for protein design, we introduce Multiflow, a generative model for structure and sequence generation.
Preprint: https://t.co/wuj9l5sTLc
Code: https://t.co/IwIoC74Odm
1/8
@json_yim We are giving a talk about the work this Tuesday 11am EST/4pm GMT @valence_ai https://t.co/d1h30l9lK6
Code for the pure discrete model: https://t.co/4zeTSX1Vv1
Code for protein co-design experiments: https://t.co/ZdOhqUOaCP
6/7
How can we apply diffusion models to data with varying dimensionality? We use jump diffusions to simultaneously generate the size and state values for varying size data e.g. molecules
https://t.co/99SvKR0NZs
w/ @willarvey@wh1lo@ValentinDeBort1@tom_rainforth@ArnaudDoucet1
I have written a blog post describing our use of Reinforcement Learning to create an online objective for sequential Variational Inference
🌐 https://t.co/es1zarYQX5
📰 https://t.co/TeJEdpYuE0
Online Variational Filtering and Parameter Learning https://t.co/572qQ9ZZsv with @AndrewC_ML@YuyangShi0 & @tom_rainforth accepted as Oral #NeurIPS2021.
We exploit forward Bellman recursions for the ELBO & its gradients in state-space models and RL ideas.