Kevin Yip

Professor, Sanford Burnham Prebys Medical Discovery Institute

[Kevin Yip @KevinYipLab]

@jogleeson_ucsd @sbpdiscovery @SanjeevRanade Talking to you tomorrow!

[Kevin Yip @KevinYipLab]

@adam_zhzhang @cqhoneybear You did a good job, Zhenghao!

[Sanju Sinha @Sanjusinha7]

Our institute is looking for a faculty in the field of Computational Biology and Artificial Intelligence.

HR didn't allow me to add this part to the job post, so here it is - "We have the best tacos and beaches in the country" ;)

https://t.co/qDxHoondw6

[Zhenghao Zhang @adam_zhzhang]

1/6 Are you really winning? 🤔️

We dive into 10 ML toolkits used in 3K+ papers and discovered some🤯 facts:

❌ Different tools give different AUPRC
🚨 Only 2/10 tools correctly implemented AUPRC
👀 Winners of ML contests ($$$) changed if using different tools

See more in 🧵:

[Kevin Yip @KevinYipLab]

Share https://t.co/lnpXnfZfJs

[Xi Fu @alexanderfuxi]

Glad to share our preprint "GET: a foundation model of transcription across human cell types"
https://t.co/HC6zo7SH1x

A interactive demo (beta) for regulatory analysis and structure catalog of transcription factor interactions can be viewed at https://t.co/Npw30UuWRl

[Mark Gerstein @MarkGerstein]

Great thanks for slides & science to @daifengwang @dspakowicz @rozowsky @JiahaoGao200 @leetx1010 @SnyderShot @barabasi @haiyuanyu @dovgreenbaum @gamzeandgursoy @ozgunharmanci @QuantumKKY @KevinYipLab @chengchao12. Appreciate very much the invitation from @iscb to #ISMBECCB2023!

[Dr Ronald Ma @DrRonaldMa1]

We are delighted to share our recent work on methylation markers for #diabetickidneydisease. We profiled methylation in peripheral blood from 1271 patients with #T2D from #HongKongDiabetesRegister. With @KevinYipLab, we identified 40 (30 novel) CpG sites asso with eGFR

[Peter Adams🇪🇺🇺🇳 @AdamsBioAging]

Great work by @jlhope1 and Linda Bradley! PSGL1 is very exciting.

[H1 Connect @H1Connect]

For #NationalDNADay, we highlight this recommendation of @MikkoRautiaine3 et al. graph-based pipeline for assembling complete, accurate diploid #genomes. @Nature @KevinYipLab

https://t.co/csXZ2kPrd5

[Peter Adams🇪🇺🇺🇳 @AdamsBioAging]

Here is an update on the new journal Aging Biology (from former EICs of Aging Cell). Aging Biology https://t.co/7Uhu8huAF8 Thanks to Antonov Foundation https://t.co/SdXGqDAbJd and you all for your patience. Please re-Tweet. @agingdoc1 @AgingBiology

[Kevin Yip @KevinYipLab]

I am joining Padres Padel the Cause this year to raise fund for cancer research. Any donations would be highly appreciated! https://t.co/GGqzzif2pN

[Kevin Yip @KevinYipLab]

Come learn about blood cancers at our Cancer Center Open House on Oct 13! Free registration at https://t.co/eIF9seF6M0

[Kevin Yip @KevinYipLab]

When I saw topologically associating domains (TADs) drawn as globular structures in review papers, I always wondered whether TADs really have functionally important 3D structures. If you also wonder about it, check out our new preprint: https://t.co/OuHQCWMGbo

[Kevin Yip @KevinYipLab]

@anideshpandelab @sbpdiscovery Congratulations, Ani! Look forward to a lot of collaborations with you!

[Kevin Yip @KevinYipLab]

Graph neural networks can capture complex object relationships. Eg, they can identify cancer genes based on omic features and protein interactions. See our new NMI paper https://t.co/5Zlg2oBp48 by @xxmen21 and @cqhoneybear to find out the tricks!

[Joseph G. Gleeson @jogleeson_ucsd]

I just had an NIH grant rejected by CSR prior to review because a figure legend creeped into the 0.5in margin. I wish NIH had other things to focus on than page margins, but be careful!

[Sanford Burnham Prebys @sbpdiscovery]

To help commemorate this year's annual Rare Disease Day Symposium, we spoke with the Omlers, whose son Damian is the only person in the world with his rare genetic mutation. Read the full story and learn more about the event https://t.co/knOihXMh01

[Sebastian S. Cocioba🪄🌷 @ATinyGreenCell]

Here is an alternative to BioRender that is TRULY FREE and actively maintained. Over 1500 vectorized images sorted by license type (all creative commons or MIT). Fully editable icons and soon they will launch an Inkscape library. Please RT.

https://t.co/8GFCa5p3A0

[Sanford Burnham Prebys @sbpdiscovery]

We are pleased to announce that bioinformaticist Kevin Yip, Ph.D. has joined our Institute, where he will support large-scale data analysis across our labs and develop new tools and models for computational biology. Welcome, Kevin! https://t.co/1mIu120CzS